Information for 6-AAAGCTGCTGCTGTAT (Motif 12)

C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
Reverse Opposite:
C G T A C A G T C T G A G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G A G T C A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.492e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 22.6bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAAGCTGCTGCTGTAT-
--AGATGCTRCTRCCHT
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAAGCTGCTGCTGTAT
--AGCAGCTGCT----
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTGCTGCTGTAT
TAAAAATGCTGACTT--
 A C G T C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAGCTGCTGCTGTAT
AAAWWTGCTGACWWD-
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T

MAFF/MA0495.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCTGCTGCTGTAT-
NAAAANTGCTGACTCAGC
 A C G T C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAGCTGCTGCTGTAT
--AGCAGCTGCTNN--
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAGCTGCTGCTGTAT
-AAANTGCTGACTNAG
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAGCTGCTGCTGTAT-
AAATTTGCTGACTTAGA
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGCTGCTGCTGTAT
-AAAATGCTGACT---
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGCTGCTGCTGTAT
-AATTTGCTGAC----
 C G T A G T C A C G T A C T A G A G T C C G A T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G C T G T C A A C G T
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T