Information for 6-AAATTGGGAGAAT (Motif 5)

G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
Reverse Opposite:
C G T A C G A T A C G T A T G C A C G T T A G C A G T C A T G C G T C A C T G A G A C T A G C T A C G T
p-value:1e-12
log p-value:-2.856e+01
Information Content per bp:1.780
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.8 +/- 32.1bp
Average Position of motif in Background45.6 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAATTGGGAGAAT
AAATTAGCATAAT
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AAATTGGGAGAAT--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAATTGGGAGAAT
-NNTTGGCANN--
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAATTGGGAGAAT-----
--TTTAGAACAATAAAAT
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AAATTGGGAGAAT---
-------GACAATGNN
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0089.1_Isx/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AAATTGGGAGAAT
ACNNCTAATTAGNNNN--
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAATTGGGAGAAT-----
-NNNNNGAACAATTGANN
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAATTGGGAGAAT
-AATTTGCATANT
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AAATTGGGAGAAT
---TTGGCA----
 G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AAATTGGGAGAAT
ATGGAAAGTCGTAAAA-
 A C G T A C G T A C G T A C G T G T C A C T G A C G T A G A C T A C G T T A C G C T A G A C T G C G T A T A C G C G T A G C T A A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A A C G T