Information for 3-GMCAGYWGGKGAKGYT (Motif 4)

A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
Reverse Opposite:
C G T A C T A G A G T C G T A C A G C T A G T C G T C A A G T C A G T C C G A T T C G A A G T C A C G T A C T G A C T G A G T C
p-value:1e-13
log p-value:-3.062e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 20.5bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GMCAGYWGGKGAKGYT
CACGGCAGTTGGTNN----
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GMCAGYWGGKGAKGYT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GMCAGYWGGKGAKGYT
CACAGCAGGGGG----
 A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GMCAGYWGGKGAKGYT
GACAGCTGCAG-----
 A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GMCAGYWGGKGAKGYT
-NCAGCTGCTG-----
 A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GMCAGYWGGKGAKGYT
NNNTGGCAGTTGGTNN----
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GMCAGYWGGKGAKGYT
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GMCAGYWGGKGAKGYT----
GCCASCAGGGGGCGCYVNNG
 A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GMCAGYWGGKGAKGYT
DCHCAGCAGGRGGCC--
 A C G T A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GMCAGYWGGKGAKGYT
VNAVCAGCTGGC------
 A C G T A C G T A C T G G T A C A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A C T G C T G A A C T G A C T G A G T C C G A T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T