Information for 8-GGAGCCCTTGAGCCTT (Motif 13)

A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A C T G A G T C A G C T G T A C G C T A G T C A A C T G C T A G A C T G A G T C A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.803
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.4 +/- 8.8bp
Average Position of motif in Background63.6 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT
-NTGCCCTTGGGCGN-
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAGCCCTTGAGCCTT-
-GAGCCCTTGTCCCTAA
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T A C G T
A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT
GCTGACCTTGAACTN-
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT-
GTTGACCTTTGACCTTT
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT
--TGACCTTGAN----
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGAGCCCTTGAGCCTT
--AGGCCTNG------
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCCTTGAGCCTT
CGGAGC-----------
 A C G T A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT
-NTGCCCANNGGTNA-
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT
--TGACCTTGACCT--
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGAGCCCTTGAGCCTT
--TGACCTTGACCT--
 A C T G T A C G C G T A A C T G G T A C A G T C A G T C C A G T C G A T A C T G C T G A A C T G A G T C A G T C G A C T A C G T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T