Information for 13-TAGACAGGGT (Motif 19)

A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A C T G C G A T A G T C A C G T C G T A
p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.6 +/- 25.9bp
Average Position of motif in Background57.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAGACAGGGT
NNAATTAGTCACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGACAGGGT
TTGACAGC--
 A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGACAGGGT
TTGACAGG--
 A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TAGACAGGGT
--CACAGN--
 A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAGGGT
CCAGACAG---
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAGGGT
BCAGACWA---
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TAGACAGGGT
CGTCTAGACA----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAGGGT
CCAGACRSVB-
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAGACAGGGT
NDGTAAACARRN-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAGACAGGGT
TGTAAACAGGA-
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C T G A C T G A C G T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T