Information for 11-TGCTATTAAT (Motif 15)

A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T G T C A C G T A A C G T C G T A A C T G A G T C C T G A
p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.4 +/- 18.6bp
Average Position of motif in Background43.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TGCTATTAAT---
--ATATTAATTAA
 A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0063.1_Hoxb8/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TGCTATTAAT---
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Hoxd8/MA0910.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATTAAT------
NAGCCATTAATTANTTA
 A C G T A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATTAAT------
NAGCCATTAATTANTTA
 A C G T A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATTAAT------
AANTTATTAATTAATTA
 A C G T A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCTATTAAT---
-GCTATAAATAGC
 A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCTATTAAT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCTATTAAT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCTATTAAT------
AGTTATTAATGAGGTC
 A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCTATTAAT---
-TCTAAAAATAGA
 A G C T A C T G A G T C A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A