Information for 8-GCCMAGRARARTC (Motif 5)

A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
Reverse Opposite:
A C T G C G T A A G C T A C G T A G T C A C G T A G C T A G T C A C G T A C T G A C T G A C T G A G T C
p-value:1e-13
log p-value:-3.192e+01
Information Content per bp:1.877
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 20.3bp
Average Position of motif in Background48.6 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCMAGRARARTC
TGCCCAGNHW----
 A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCMAGRARARTC
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCMAGRARARTC
TGCCAA--------
 A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCMAGRARARTC-
AACCCAATAAAATTCG
 A C G T A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCMAGRARARTC
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCMAGRARARTC
-CCAATAAAAC--
 A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCCMAGRARARTC--
-----GGAAATTCCC
 A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCMAGRARARTC--
TGCCAAAATAAACANN
 A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCCMAGRARARTC
ATTTCCAAGAA-----
 A C G T A C G T A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCMAGRARARTC
TTTCCCAGAAN----
 A C G T A C G T A C T G G T A C A G T C G T A C C G T A A C T G C T G A C G T A C T A G C G T A C T G A A C G T A G T C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T