Information for 17-CTCGGGAAAT (Motif 21)

A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T
Reverse Opposite:
C G T A A G C T C G A T A C G T T G A C T A G C T A G C T C A G C G T A C T A G
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.750
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif180.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets48.8 +/- 27.7bp
Average Position of motif in Background48.5 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCGGGAAAT--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCGGGAAAT
GCTCGTAAAAA
 A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCGGGAAAT--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCGGGAAAT
NACAGGAAAT
 A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

GFX(?)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCGGGAAAT
ATTCTCGCGAGA-
 A C G T A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCGGGAAAT-
ANTTCTCAGGAANNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCGGGAAAT
TTCTNMGGAA--
 A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCGGGAAAT--
GTTCTCGCGAGANCC
 A C G T A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCGGGAAAT
NACAGGAAAT
 A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCGGGAAAT---
CTCTCGCGAGATCTG
 A C G T A C G T A G T C A C G T A G T C A T C G A T C G A C T G C G T A G C T A C T G A G C A T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G