Information for 10-CTTGGCCCAG (Motif 13)

T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G
Reverse Opposite:
T G A C C G A T A C T G A T C G A T C G A G T C A G T C G T C A C T G A A T C G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.830
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif213.3
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets47.5 +/- 28.0bp
Average Position of motif in Background46.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTGGCCCAG
NTTGGCANN-
 T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTTGGCCCAG
-TTGGCA---
 T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTTGGCCCAG---
---TGCCCAGNHW
 T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGCCCAG
NNTTGGCANN-
 A C G T T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGCCCAG----
NNCNTGACCCCGCTCT
 A C G T A C G T T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGCCCAG----
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGCCCAG----
NNNNTGACCCGGCGCG
 A C G T A C G T T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTGGCCCAG
--AGGCCTAG
 T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTTGGCCCAG
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTGGCCCAG--
--TGACCTARTT
 T A G C A G C T A C G T C T A G T C A G A T G C A T G C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T