Information for 5-TTCHCCAKCTGCCATB (Motif 10)

A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
Reverse Opposite:
T A C G C G T A A C G T A T C G C T A G G T A C C G T A A C T G G T C A A C G T C T A G A T C G C G T A A C T G C G T A C G T A
p-value:1e-12
log p-value:-2.909e+01
Information Content per bp:1.766
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 26.3bp
Average Position of motif in Background27.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCHCCAKCTGCCATB-
CTCAGCAGCTGCTACTG
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTCHCCAKCTGCCATB
--NNGCAGCTGTC---
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTCHCCAKCTGCCATB
--NNGCAGCTGTT---
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTCHCCAKCTGCCATB
-CGACCAACTGCCGTG
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTCHCCAKCTGCCATB
---TGCAGCTGTCCCT
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTCHCCAKCTGCCATB
---NVCAGCTGBBNN-
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTCHCCAKCTGCCATB
---GCCAGCTGBTNB-
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTCHCCAKCTGCCATB-
-CGACCAACTGCCATGC
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTCHCCAKCTGCCATB
---ACCATCTGTT---
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTCHCCAKCTGCCATB
---GCCATCTGTT---
 A C G T A C G T G T A C G A C T A T G C A G T C C G T A A C G T A G T C A C G T A C T G A G T C A T G C C G T A A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T