Information for 3-CGCATGCGCA (Motif 2)

T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A
Reverse Opposite:
A G C T C T A G T G A C T C A G G T A C T G C A A C G T T A C G T A G C A C T G
p-value:1e-69
log p-value:-1.607e+02
Information Content per bp:1.591
Number of Target Sequences with motif295.0
Percentage of Target Sequences with motif30.99%
Number of Background Sequences with motif4440.2
Percentage of Background Sequences with motif10.08%
Average Position of motif in Targets52.8 +/- 16.7bp
Average Position of motif in Background49.1 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
GCGCCTGCGCA
 A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAG
 A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAC
 A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGCATGCGCA--
---ATGCCCACC
 T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA-----
GGGTGTGCCCAAAAGG
 A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA-----
TGGCGCGCGCGCCTGA
 A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
GGCACGCGTC
 T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCATGCGCA--
NNGCNCTGCGCGGC
 A C G T A C G T T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCATGCGCA
--CACGCA--
 T G A C A T C G A T G C T G C A A C G T C A T G A G T C A C T G G A T C T C G A
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T