Information for 2-GAGCASACRTRTAGTG (Motif 7)

A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
Reverse Opposite:
A T G C C G T A G T A C A C G T C G T A G A T C C G T A A G T C T A C G A C G T A T C G A C G T A T C G A G T C A G C T A G T C
p-value:1e-13
log p-value:-3.123e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.4 +/- 21.1bp
Average Position of motif in Background38.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGCASACRTRTAGTG
GGGAGGACNG--------
 A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGCASACRTRTAGTG
CGAAGCACACAAAATA--
 A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GAGCASACRTRTAGTG
TACATGTGCACATAAAA----
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAGCASACRTRTAGTG
CCAGGAACAG--------
 A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GAGCASACRTRTAGTG
NNNNTTGGGCACNNCN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GAGCASACRTRTAGTG
CAGATGTGCACATACGT----
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------GAGCASACRTRTAGTG
NNNVCTGWGYAAACASN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GAGCASACRTRTAGTG
---AACACGTGTT---
 A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GAGCASACRTRTAGTG
--CCAGACRSVB----
 A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GAGCASACRTRTAGTG
NGTGGGCAT----------
 A C G T A C G T A C G T A C T G C T G A A C T G A T G C C G T A T A G C C G T A A T G C T C A G C G A T C T A G A C G T G T C A A C T G G C A T A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T