Information for 15-TTGTCTTCAGGAT (Motif 23)

G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G A T A C T G C T G A C G T A A C T G C G T A A G T C G T C A C G T A
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 25.9bp
Average Position of motif in Background54.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TTGTCTTCAGGAT--
-----ANCAGGATGT
 G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TTGTCTTCAGGAT
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TTGTCTTCAGGAT
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTGTCTTCAGGAT
CCATTGTTTT------
 A C G T A C G T A C G T G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTGTCTTCAGGAT
---ACTTCCGGNT
 G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGTCTTCAGGAT
TWGTCTGV-----
 G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTGTCTTCAGGAT-
NGCTTTCTAGGAAN
 G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTGTCTTCAGGAT
CCATTGTATGCAAAT-
 A C G T A C G T A C G T G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTGTCTTCAGGAT-
NNNCTTTCCAGGAAA
 A C G T G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTGTCTTCAGGAT---
-TNACTTCCGGNTNNN
 G C A T A C G T A C T G A C G T A G T C A C G T A G C T A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C T G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G T C A G C G A T G T A C T G A C A C G T