Information for 8-AAACCAGACC (Motif 12)

C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C
Reverse Opposite:
C A T G C T A G C A G T T G A C A C G T A C T G A T C G C G A T A C G T C G A T
p-value:1e-11
log p-value:-2.743e+01
Information Content per bp:1.831
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif136.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets52.0 +/- 26.7bp
Average Position of motif in Background50.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AAACCAGACC
ATGCCAGACN
 C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAACCAGACC-----
CAAATCCAGACATCACA
 A C G T A C G T C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAACCAGACC-
---CCAGACAG
 C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAACCAGACC
AAACCACANN
 C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AAACCAGACC---
---CCAGACRSVB
 C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAACCAGACC
AAACCACAGC
 C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAACCAGACC
NAAACCACAG-
 A C G T C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAACCAGACC-
AAACCACAGAN
 C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACCAGACC-
NWAACCACADNN
 A C G T C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AAACCAGACC
TGACANARRCCAGRC-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A T A G C A G T C G T C A A C T G G T C A A G T C G T A C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T