Information for 2-KGCTATTTTTAGY (Motif 2)

C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
Reverse Opposite:
C T G A G A T C A G C T G T C A C G T A C G T A C G T A C G T A C G A T C G T A T C A G G T A C G T C A
p-value:1e-69
log p-value:-1.594e+02
Information Content per bp:1.674
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.19%
Number of Background Sequences with motif245.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets52.6 +/- 21.7bp
Average Position of motif in Background50.0 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:KGCTATTTTTAGY
-KCTATTTTTRGH
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:KGCTATTTTTAGY
-GCTATTTTTAGC
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:KGCTATTTTTAGY--
TTCTATTTTTAGNNN
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:KGCTATTTTTAGY
-GCTATTTTTGGM
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:KGCTATTTTTAGY
-GCTATTTATAGC
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:KGCTATTTTTAGY
-TCTATTTATAGN
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:KGCTATTTTTAGY
-TCTATTTTTAGA
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:KGCTATTTTTAGY
--CTATTTTTGG-
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.80
Offset:2
Orientation:forward strand
Alignment:KGCTATTTTTAGY
--CCATATATGG-
 C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---KGCTATTTTTAGY
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T C A G T C A T G A G T C G A C T C G T A C G A T G A C T G C A T G C A T A C G T C T G A C T A G G A C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T