p-value: | 1e-6 |
log p-value: | -1.385e+01 |
Information Content per bp: | 1.838 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.35% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 48.0 +/- 26.2bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG -----VRRACAAWGG- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG ------GAACAATGGN |
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Sox6/MA0515.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG -----AAAACAATGG- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG -----RNAACAATGG- |
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Sox2/MA0143.3/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG -------AACAAAGG- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG -------RACAAWGG- |
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SOX10/MA0442.1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG --------ACAAAG-- |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG -----VRAACAATGG- |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GWGMGAKMACAAWGRG---- ---NNTNNACAATGGGANNN |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GWGMGAKMACAAWGRG--- --AGAAGAACAAAGGACTA |
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