Information for 12-CTCTCTGTAATCT (Motif 9)

A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
Reverse Opposite:
C T G A A C T G G T C A A G C T A G C T G T C A A G T C C G T A T A C G C G T A C T A G C G T A C T A G
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.803
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.4 +/- 18.7bp
Average Position of motif in Background46.2 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCTCTGTAATCT
--CTTTGT-----
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTGTAATCT
AGGVNCCTTTGT-----
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTCTCTGTAATCT
-----YSTTATCT
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTCTGTAATCT--
AACCCTTTGATCTTT
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTCTGTAATCT--
NCNTTTGTTATTTNN
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCTCTGTAATCT
--TTATGTAACAT
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCTCTGTAATCT
-----TGTCANYT
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCTCTGTAATCT
----NTGTCAN--
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGTAATCT
-TNCCTTTGATGT
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGTAATCT--
-TNCCTTTGATCTTN
 A G T C C G A T A G T C A C G T A G T C A C G T A C T G A C G T T C G A C T G A A C G T G T A C A G C T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T