Information for 23-CTCATCMTTATGG (Motif 25)

G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G
Reverse Opposite:
T G A C G A T C G C T A A C G T G C T A T G C A A C T G T C A G G T C A C A G T A C T G C T G A A C T G
p-value:1e-7
log p-value:-1.615e+01
Information Content per bp:1.693
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif71.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets67.3 +/- 25.9bp
Average Position of motif in Background46.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Neurog1/MA0623.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCATCMTTATGG-
----ACCATATGGT
 G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCATCMTTATGG--
GCAACCTCATTATNNNN
 A C G T A C G T G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCATCMTTATGG
GTCATN-------
 G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATCMTTATGG
NNNACCTCATTATCNTN-
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCATCMTTATGG--
CTCATGAATATTCAT
 G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCATCMTTATGG
CTCATTTGCATW-
 G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCATCMTTATGG----
--CTTTGTTATGCAAAT
 G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCATCMTTATGG-
TATCATAATTAAGGA
 A C G T G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATCMTTATGG
TAGTGATCATCATTA---
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCATCMTTATGG----
--CATTGTTATGCAAAT
 G T A C A G C T G T A C G T C A A C G T A G T C T G A C A C G T C G A T T G C A C G A T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T