Information for 20-CTGGGAATCTTCT (Motif 22)

G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A C G T A A T C G C G T A A C G T G A C T A T G C A G T C A T G C C G T A A C T G
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 21.3bp
Average Position of motif in Background44.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGGGAATCTTCT
NCTGTCAATCAN--
 A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAATCTTCT
WDNCTGGGCA------
 A C G T A C G T A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAATCTTCT
CSTGGGAAAD----
 A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGGGAATCTTCT
GSCTGTCACTCA---
 A C G T A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGGGAATCTTCT
SCTGTCAVTCAV--
 A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGAATCTTCT
GYCTGGYYTNTGTCA
 A C G T A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGAATCTTCT
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGGGAATCTTCT
----CAAGCTT--
 G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAATCTTCT
CTTCTGGGAAA-----
 A C G T A C G T A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAATCTTCT
CTTGGCAA------
 A C G T G T A C A C G T A T C G C T A G T A C G C T G A G T C A A C G T A T G C C G A T A C G T A G T C C G A T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T