Information for 19-RTGRYATTTYATG (Motif 21)

C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C T G A C G T A C G T A G T C A A C G T C T G A A G T C A G T C C G T A G A T C
p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.810
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.0 +/- 25.0bp
Average Position of motif in Background47.8 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.72
Offset:5
Orientation:forward strand
Alignment:RTGRYATTTYATG--
-----ATTTCCTGTN
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:RTGRYATTTYATG--
-----ATTTCCTGTN
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RTGRYATTTYATG-
----CACTTCCTGT
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:RTGRYATTTYATG--
-----NTTTTATGAC
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RTGRYATTTYATG-----
--NGANTTTTATGGCTCN
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:RTGRYATTTYATG----
------TTTTATGGCTN
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:RTGRYATTTYATG---
------TTTTATTRGN
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RTGRYATTTYATG
-TGGCAGTTGN--
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RTGRYATTTYATG-----
-ANTAATTTTATGGCCGN
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RTGRYATTTYATG--
-----NTTTTATTGG
 C T A G C G A T A C T G C T A G A G C T C G T A A C G T A C G T A C G T A G C T T G C A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G