Information for 11-ACAGCKTGGC (Motif 19)

G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C G T C A T G C A A C T G A G T C C G A T A C T G C A G T
p-value:1e-10
log p-value:-2.354e+01
Information Content per bp:1.846
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif114.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets41.2 +/- 26.0bp
Average Position of motif in Background50.4 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCKTGGC
DCTCAGCAGG--
 A C G T A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACAGCKTGGC
NAACAGCTGG--
 A C G T A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAGCKTGGC-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ACAGCKTGGC---
----NTTGGCANN
 G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCKTGGC
CACAGN-----
 A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACAGCKTGGC-
-----TTGGCA
 G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCKTGGC---
DCHCAGCAGGRGGCC
 A C G T A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACAGCKTGGC-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGCKTGGC-
CACAGCAGGGGG
 A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGCKTGGC
AACAGCTG---
 A C G T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T