Information for 17-AAATCCGMGAGGT (Motif 18)

C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G C T A G T C A C G T G T A C A C T G A C T G C T G A A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 28.8bp
Average Position of motif in Background28.9 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATCCGMGAGGT
CAAATCACTG----
 A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAATCCGMGAGGT
TTAATCCG------
 A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAATCCGMGAGGT
TACATCCGGGT---
 A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAATCCGMGAGGT
TTAATCCT------
 A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAATCCGMGAGGT
GATAACATCCTAGTAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAATCCGMGAGGT
CTTAATCCC------
 A C G T A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAATCCGMGAGGT
CCTAATCCGC-----
 A C G T A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAATCCGMGAGGT--
GNNACCGAGAATNNN
 C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAATCCGMGAGGT
TAATCCCN-----
 C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAATCCGMGAGGT
ATAATCCC------
 A C G T C G T A C G T A C G T A A G C T A G T C A G T C A C T G T G A C A C T G C T G A A C T G T A C G A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T