Information for 6-ATGGAWTGCAAAAAGA (Motif 14)

G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
Reverse Opposite:
A C G T A T G C A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A C G A T C A G T G T A C A G T C C G T A A C G T
p-value:1e-12
log p-value:-2.912e+01
Information Content per bp:1.775
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 18.7bp
Average Position of motif in Background52.5 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATGGAWTGCAAAAAGA-
--CAATTGCAAAAATAT
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGGAWTGCAAAAAGA
CCATTGTATGCAAAT---
 A C G T A C G T G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATGGAWTGCAAAAAGA
CATTGTTATGCAAAT---
 A C G T A C G T G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGGAWTGCAAAAAGA
---TTATGCAAAT---
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGGAWTGCAAAAAGA
CTTTGTTATGCAAAT---
 A C G T A C G T G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATGGAWTGCAAAAAGA
---ATATGCAAATNNN
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGAWTGCAAAAAGA
-TGGAATGT-------
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATGGAWTGCAAAAAGA-
-TTGTATGCAAATTAGA
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A A C G T
A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATGGAWTGCAAAAAGA-
-TTGTATGCAAATTAGA
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A A C G T
A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATGGAWTGCAAAAAGA-
-TTGTATGCAAATTAGA
 G T C A A C G T C T A G A C T G G T C A C G T A A C G T A C T G A G T C C G T A G T C A C G T A T G C A C G T A T A C G T G C A A C G T
A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A