Information for 10-ACACTAGATCATT (Motif 10)

C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A A C G T A C T G G T C A C G A T A G T C C G A T C T G A A T C G A C G T C A T G C G A T
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 20.2bp
Average Position of motif in Background40.7 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACACTAGATCATT
TATAAGTAGGTCAA-
 A C G T A C G T C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACACTAGATCATT------
--ANNAGTTAATTAGTTAN
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACACTAGATCATT--
GAAAACTAGTTAACATC
 A C G T A C G T C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ACACTAGATCATT--
-----AGCTCATTAT
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACACTAGATCATT
-AAYTAGGTCA--
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACACTAGATCATT-
TTATTAGTACATAN
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PH0074.1_Hoxd1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACACTAGATCATT------
--NNNAGCTAATTAGCTTA
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACACTAGATCATT---
-AACAATAACATTGTT
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T A C G T
A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACACTAGATCATT------
--NNNACCTCATTATCNTN
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ACACTAGATCATT---
------GGTAATTAGC
 C G T A G A T C C G T A A T G C A G C T C G T A A C T G G C T A A C G T G T A C C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C