Information for 11-TTACTTAGTC (Motif 11)

A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
Reverse Opposite:
A C T G T C G A A T G C A C G T C G T A C G T A A C T G A C G T T C G A C G T A
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets44.7 +/- 26.0bp
Average Position of motif in Background53.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

mix-a/MA0621.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTACTTAGTC
AATTAATTAGT-
 A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTACTTAGTC
TATTACGTAACA
 A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

PH0135.1_Phox2a/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TTACTTAGTC-
CAGCATTAATTAGTAG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C A C G T
A G T C T C G A A C T G G T A C T C G A G A C T A G C T C G T A C T G A C G A T A C G T C T G A C T A G A G C T T C A G T A C G

PH0175.1_Vax2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTACTTAGTC---
GNCTTAATTAGTGNNN
 A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

LHX2/MA0700.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTACTTAGTC
NNTAATTAGN-
 A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTACTTAGTC
ANGTTACATAA--
 A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T

POU6F1/MA0628.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTACTTAGTC
ATTAATTAAT-
 A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTACTTAGTC
TTAATTAG--
 A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTACTTAGTC--
GATAATTAATTAGTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

Alx1/MA0854.1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTACTTAGTC---
CGAATTAATTAATCACC
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C G C A T A C G T C G T A A T C G A G C T G T A C A C G T A C G T A C G T
G A T C A T C G G T C A C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T G A T C G T C A G A T C G A T C