Information for 13-GGAGAGATCACTA (Motif 17)

T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A
Reverse Opposite:
A C G T C G T A C A T G C A G T A T C G G T C A C G A T A G T C A C G T A G T C G C A T A T G C A G T C
p-value:1e-6
log p-value:-1.384e+01
Information Content per bp:1.686
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.9 +/- 24.2bp
Average Position of motif in Background48.8 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGAGAGATCACTA
---AAGGTCAC--
 T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAGAGATCACTA
--AGRGGTCA---
 T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGATCACTA-
TCTCAAAGGTCACCTG
 A C G T A C G T T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGAGATCACTA
--TRAGGTCA---
 T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGAGATCACTA----
NNNNTGAGCACTGTNNG
 T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGATCACTA
ANGNAAAGGTCA---
 A C G T A C G T T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGAGAGATCACTA
-CAAAGGTCAG--
 T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGATCACTA-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGATCACTA--
GGCGAGGGGTCAAGGGC
 A C G T A C G T T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGATCACTA-
TCTCAAAGGTCACGAG
 A C G T A C G T T C A G T A C G C G T A C T A G T C G A A C T G G C T A C A G T A T G C G T C A G A T C C G A T T G C A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G