Information for 6-GGGAAAGCAC (Motif 9)

C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
Reverse Opposite:
C T A G G A C T C T A G A G T C G C A T G C A T A C G T G T A C A G T C A G T C
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.825
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif223.3
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets41.7 +/- 24.9bp
Average Position of motif in Background50.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCAC-
-GGAAANCCCC
 C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAAGCAC
CSTGGGAAAD---
 A C G T A C G T A C G T C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGAAAGCAC--
GGGAAATCCCCN
 C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCAC-
-GGAAATTCCC
 C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGAAAGCAC
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCAC-
-GGAAATCCCC
 C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGAAAGCAC
GGCGGGAARN---
 A C G T A C G T A C G T C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGAAAGCAC
GGGCGGGAAGG---
 A C G T A C G T A C G T A C G T C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAAGCAC
NNTGGAAANN--
 A C G T A C G T C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGAAAGCAC
TGGCGGGAAAHB--
 A C G T A C G T A C G T A C G T C T A G A C T G C A T G C G T A C G T A C G T A C T A G G A T C C T G A G A T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T