Information for 5-CTGTGAATAGTBCCTT (Motif 6)

G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G A C T G T A G C C G T A T G A C A G C T G T C A C G A T A C G T G T A C C T G A G A T C C G T A A C T G
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.2 +/- 13.8bp
Average Position of motif in Background62.4 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAATAGTBCCTT
ACTATAAATAGA-----
 A C G T G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAATAGTBCCTT
GCTATAAATAGC-----
 A C G T G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAATAGTBCCTT
TCTAAAAATAGA-----
 A C G T G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTGTGAATAGTBCCTT
CCAAAAATAG------
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGTGAATAGTBCCTT--
-GANNATTAATCCCTNNN
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T A C G T A C G T
A C G T C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGTGAATAGTBCCTT
-CCTTAATNGNTTTT-
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGTGAATAGTBCCTT--
-GNNNATTAATCCCTNCN
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T A C G T A C G T
A C G T C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTGTGAATAGTBCCTT-
---TTATTAGTACATAN
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTGTGAATAGTBCCTT
--ATGAATATTC----
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGTGAATAGTBCCTT
WYATGCATWATGCAT-
 G T A C C G A T C T A G A G C T A C T G C G T A C G T A A C G T C T G A A C T G C G A T A C T G A G T C A G T C A C G T A G C T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T A C G T