Information for 4-AAGGCTGGAT (Motif 4)

C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T
Reverse Opposite:
C G T A C A G T T A G C A G T C C G T A A C T G A G T C G T A C C G A T A G C T
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.847
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif68.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets55.8 +/- 31.1bp
Average Position of motif in Background50.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGGCTGGAT
--NGCTN---
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGCTGGAT
TWGTCTGV--
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGGCTGGAT
CWGGCGGGAA
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGCTGGAT--
-GGGCGGGAAGG
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGGCTGGAT--
--GGCGGGAARN
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAGGCTGGAT---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTGGAT-
BTKGGCGGGAAA
 A C G T C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

POL002.1_INR/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGGCTGGAT
NNNANTGA--
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGGCTGGAT--
-GGGCGGGAAGG
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGGCTGGAT-
-GGTCTGGCAT
 C T G A C G T A A C T G A C T G G T A C A C G T A C T G A C T G G T C A G C A T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T