p-value: | 1e-12 |
log p-value: | -2.871e+01 |
Information Content per bp: | 1.799 |
Number of Target Sequences with motif | 23.0 |
Percentage of Target Sequences with motif | 2.66% |
Number of Background Sequences with motif | 171.5 |
Percentage of Background Sequences with motif | 0.36% |
Average Position of motif in Targets | 52.0 +/- 26.8bp |
Average Position of motif in Background | 52.5 +/- 30.7bp |
Strand Bias (log2 ratio + to - strand density) | 2.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAGGATTTTG NGGGATTA-- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAGGATTTTG VRGGATTARN |
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Crx/MA0467.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GAGGATTTTG AAGAGGATTAG- |
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OTX2/MA0712.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAGGATTTTG -NGGATTAA- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAGGATTTTG GNGGATTAGN |
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PITX3/MA0714.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAGGATTTTG -GGGATTANN |
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PB0099.1_Zfp691_1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GAGGATTTTG-- NNNNTGAGCACTGTNNG |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GAGGATTTTG-- CTACTAGGATGTNNTN |
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Dmbx1/MA0883.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAGGATTTTG--- TGAACCGGATTAATGAA |
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PH0025.1_Dmbx1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAGGATTTTG--- TGAACCGGATTAATGAA |
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