Information for 4-CCCTCTGTCG (Motif 3)

A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G
Reverse Opposite:
A G T C C T A G C T G A A G T C C G T A A C T G G C T A A C T G A C T G A C T G
p-value:1e-15
log p-value:-3.464e+01
Information Content per bp:1.877
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif114.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets49.1 +/- 18.5bp
Average Position of motif in Background46.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGTCG
GCCATCTGTT-
 A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCTCTGTCG--
CGACCAACTGCCGTG
 A C G T A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGTCG
ACCATCTGTT-
 A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTGTCG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGTCG
RCCATMTGTT-
 A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGTCG---
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGTCG--
GACCCCCCGCTGTG
 A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCTCTGTCG---
CGACCAACTGCCATGC
 A C G T A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTGTCG
CGCCCCCTGACA
 A C G T A C G T A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTCTGTCG
-CCTTTGTT-
 A G T C A G T C A G T C C A G T A G T C A C G T A C T G G A C T A G T C A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T