Information for 6-AACCTAYAGG (Motif 9)

G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G
Reverse Opposite:
G T A C G T A C C A G T C T A G A C G T G T C A T A C G A T C G A G C T A C G T
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.683
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.0 +/- 33.9bp
Average Position of motif in Background51.3 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACCTAYAGG
AACCGANA--
 G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AACCTAYAGG-
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A C G T G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AACCTAYAGG------
ANTNTTACATGTATNTA
 A C G T G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AACCTAYAGG-------
AATATACATGTAATATA
 G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AACCTAYAGG----
TGNCCATATATGGTCA
 A C G T A C G T G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AACCTAYAGG-------
AAAATACATGTAAAAAT
 G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AACCTAYAGG-------
AATATACATGTAAAACA
 G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AACCTAYAGG
CCAACTGCCA--
 A C G T A C G T G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AACCTAYAGG
NHAACBGYYV--
 A C G T A C G T G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AACCTAYAGG-------
AAAATACATGTAATACT
 G T C A T C G A T A G C A T G C A C G T G T C A G A T C G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T