Information for 4-AGRGCGCCAT (Motif 2)

C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T
Reverse Opposite:
C G T A A G C T A C T G A T C G A T G C C A T G A G T C A G T C A G T C G A C T
p-value:1e-19
log p-value:-4.605e+01
Information Content per bp:1.707
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.50%
Number of Background Sequences with motif303.4
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets49.3 +/- 27.6bp
Average Position of motif in Background48.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AGRGCGCCAT----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGRGCGCCAT-
TTTGGCGCCAAA
 A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGRGCGCCAT
AGCGCGCC--
 C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AGRGCGCCAT----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGRGCGCCAT---
ANCGCGCGCCCTTNN
 A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGRGCGCCAT--
-GTCCGCCATTA
 C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGRGCGCCAT---
NTCGCGCGCCTTNNN
 A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGRGCGCCAT----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGRGCGCCAT---
AAAATGGCGCCATTTT
 A C G T A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGRGCGCCAT---
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T C T G A T C A G T C A G A C T G G T A C A T C G A T G C T G A C C T G A G C A T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A