Information for 4-CCAGAGGGAG (Motif 4)

G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G
Reverse Opposite:
T G A C A C G T T A G C A G T C G T A C G A C T A T G C A C G T C T A G C T A G
p-value:1e-23
log p-value:-5.420e+01
Information Content per bp:1.813
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif539.2
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets47.1 +/- 26.5bp
Average Position of motif in Background48.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCAGAGGGAG--
--AGAGGAAGTG
 G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G A C G T A C G T
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAGGGAG-----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGGGAG
AACAGATGGC-
 A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCAGAGGGAG------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCAGAGGGAG--
--GGCGGGAARN
 G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCAGAGGGAG
WTGSCCTSAGGS--
 A C G T A C G T A C G T A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGGGAG
AACAGATGGT-
 A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAGGGAG
ATGCCAGACN---
 A C G T A C G T A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAGAGGGAG-
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGAGGGAG--
-GGGCGGGAAGG
 G A T C G A T C T G C A A T C G C T G A A C T G C T A G A T C G T G C A A C T G A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G