Information for 12-CATATTAAAA (Motif 24)

A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A C G T A A C G T G T C A A C G T C T A G
p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.946
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.4 +/- 27.7bp
Average Position of motif in Background46.3 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CATATTAAAA
---ATTAAA-
 A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CATATTAAAA----
CCGTATTATAAACAA
 A C G T A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CATATTAAAA-
NTAATTAATAT
 A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CATATTAAAA-
--NATTCAAAT
 A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATATTAAAA---
AAATAAGAAAAAAC
 A C G T A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CATATTAAAA-----
NCGTATTATAATCNTA
 A C G T A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CATATTAAAA-----
NANTATTATAATTNNN
 A C G T A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATATTAAAA-----
AATGCAATAAAATTTAT
 A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATATTAAAA
CGGTTTCAAA
 A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATATTAAAA----
AATATTAATAAAGA
 A G T C C G T A A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A