Information for 11-CAGTGGTTCT (Motif 23)

A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A G T C A G T C C G T A A G T C A C G T C T A G
p-value:1e-7
log p-value:-1.813e+01
Information Content per bp:1.945
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.1 +/- 26.8bp
Average Position of motif in Background58.1 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGTTCT
GCTGTGGTTT-
 A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGGTTCT
NNTGTGGTTT-
 A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGTTCT
TTRAGTGSYK--
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGTTCT
GTCTGTGGTTT-
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGTGGTTCT
--GTGGAT--
 A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGTTCT
NNHTGTGGTTWN
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGGTTCT
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGTGGTTCT
CTGTGGTTTN
 A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGTTCT
TTAAGTGCTT--
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGGTTCT
NTCAAGTGGN---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G A C T G A C G T C G A T A G T C A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T