Information for 15-AAGGATGGCTGGG (Motif 21)

C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C C T G A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 14.8bp
Average Position of motif in Background47.9 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGATGGCTGGG----
NAGANTGGCGGGGNGNA
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGGATGGCTGGG
CAAGATGGCGGC-
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGGATGGCTGGG
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAGGATGGCTGGG--
-----WDNCTGGGCA
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGATGGCTGGG
CAAGATGGCGGC-
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGGATGGCTGGG-----
-GTATTGGGTGGGTAATT
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGGATGGCTGGG-
GGGGCTYGKCTGGGA
 A C G T C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAGGATGGCTGGG
NGTCACGCTTGGCTGC-
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAGGATGGCTGGG----
-----TGTCAGGGGGCG
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGGATGGCTGGG
----TWGTCTGV-
 C G T A C G T A A C T G C T A G C G T A A C G T A C T G A C T G A G T C G A C T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T