Information for 18-GCAGCAGACACGC (Motif 23)

A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G G T A C A C T G A C G T A C T G A C G T A G T C C G A T A C T G G T A C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.114e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 29.2bp
Average Position of motif in Background57.3 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGACACGC--
AGCGGCACACACGCAA
 A C G T A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCAGCAGACACGC
---CCAGACRSVB
 A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:GCAGCAGACACGC-
--------CACGCA
 A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGACACGC-
AGCAACAGCCGCACC
 A C G T A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAGCAGACACGC
---CCAGACAG--
 A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCAGCAGACACGC--
-----TBGCACGCAA
 A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGCAGACACGC
---BCAGACWA--
 A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGACACGC
ANCAGCTG------
 A C G T A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCAGCAGACACGC
AGAGRRACAGCWGAC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GCAGCAGACACGC---
------GGCACGCGTC
 A C T G A G T C G T C A A C T G A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C