Information for 11-TAAATGCCTC (Motif 19)

A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
Reverse Opposite:
A T C G C G T A T A C G T A C G G T A C T C G A A C G T A C G T C G A T C G T A
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.726
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif153.7
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets41.1 +/- 22.5bp
Average Position of motif in Background51.6 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barhl1/MA0877.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAAATGCCTC
GCTAATTGCT--
 A C G T A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAAATGCCTC
GCTAAACGGT--
 A C G T A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGCCTC
TTAAGTGC---
 A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGCCTC
TTAAGTGGN--
 A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAATGCCTC
CTAATKGV---
 A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGCCTC
TTAAGTGGT--
 A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAAATGCCTC--
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAAATGCCTC
YAACBGCC--
 A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAAATGCCTC
TAATTGGT--
 A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C
A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TAAATGCCTC-
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A T G C A A G C T A C T G A T G C A T G C C G A T A T G C A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A