Information for 9-TGTGYGYAGG (Motif 17)

A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T T C G A A G T C C T G A G T A C C G T A A G T C C G T A
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.821
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif169.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets47.2 +/- 26.0bp
Average Position of motif in Background50.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGYGYAGG-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGYGYAGG-
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGYGYAGG--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTGYGYAGG--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGTGYGYAGG-
CCATTGTATGCAAAT
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGTGYGYAGG-----
---SDGCAGGTGCNS
 A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGYGYAGG--
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------TGTGYGYAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGTGYGYAGG--
--TGCGTGGGYG
 A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGTGYGYAGG---
--TGCGTGGGCGT
 A C G T A C T G C G A T A C T G A G C T C T A G A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T