Information for 10-GKGACTYTSCGGMSTG (Motif 16)

A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A T C G A C G T A G T C A G T C A C T G A T C G C G T A C T A G C G T A A C T G A C G T A G T C G T A C A G T C
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 18.9bp
Average Position of motif in Background17.2 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GKGACTYTSCGGMSTG
GGGAATTTCC------
 A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GKGACTYTSCGGMSTG
GGGAATTTCC------
 A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GKGACTYTSCGGMSTG
GGGGATTTCC------
 A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GKGACTYTSCGGMSTG
GGGGATTTCC------
 A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GKGACTYTSCGGMSTG
TACGAGACTCCTCTAAC--
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GKGACTYTSCGGMSTG
TTGACTTTT-------
 A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GKGACTYTSCGGMSTG
---NRYTTCCGGY---
 A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
A C G T A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GKGACTYTSCGGMSTG
NCGTGACN----------
 A C G T A C G T A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---GKGACTYTSCGGMSTG
AGGATGACTCAGCAC----
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----GKGACTYTSCGGMSTG
NNATTGGACTTTNGNN----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A C G T G A T C G A C T A T G C A G T C A C T G A C T G G T A C A T C G A C G T A C T G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T A C G T