Information for 8-CCGTCTGTAG (Motif 7)

A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
Reverse Opposite:
A G T C C G A T C G T A A T G C C G T A A C T G C G T A A T G C A C T G A C T G
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.907
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif76.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets55.3 +/- 21.2bp
Average Position of motif in Background49.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCGTCTGTAG
VBSYGTCTGG--
 A C G T A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCGTCTGTAG
CTGTCTGG--
 A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCGTCTGTAG
ACCATCTGTT-
 A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCGTCTGTAG
GCCATCTGTT-
 A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGTCTGTAG
RCCATMTGTT-
 A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGTCTGTAG---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCGTCTGTAG--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGTCTGTAG
CCATATGT--
 A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCGTCTGTAG
CGACCATCTGTT-
 A C G T A C G T A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCGTCTGTAG--
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T C G A C G T A G T C C G A T A T C G A C G T C G T A C T A G A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T