Information for 5-TGMCAAATGCCAMAGR (Motif 8)

G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C G T G A C T C T A G A C T G A G T C G T C A G C A T C A G T C G A T C T A G A C G T T G A C C T G A
p-value:1e-11
log p-value:-2.614e+01
Information Content per bp:1.663
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 23.8bp
Average Position of motif in Background49.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0009.1_Bsx/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGMCAAATGCCAMAGR
CAGGTAATTACCTCAG-
 A C G T G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGMCAAATGCCAMAGR----
-----ANTGCCTGAGGCAAN
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGMCAAATGCCAMAGR
--CCAACTGCCA----
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGMCAAATGCCAMAGR
-AACATATGTC-----
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGMCAAATGCCAMAGR
-AACATATGTT-----
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGMCAAATGCCAMAGR
GGTGCCAAGT--------
 A C G T A C G T G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGMCAAATGCCAMAGR
CGGCACGTGCCA----
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGMCAAATGCCAMAGR
-GCCATATGGT-----
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGMCAAATGCCAMAGR--
-------AGCCTCAGGCA
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGMCAAATGCCAMAGR
--ACATATGG------
 G A C T A C T G T G C A A G T C G C T A G C T A C G T A C A G T C T A G T G A C A G T C C G T A T G C A C G T A C T A G C T G A
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T