Information for 4-GTTGAVTAATGHA (Motif 4)

A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
Reverse Opposite:
C G A T C A T G A G T C G T C A A C G T A C G T G T C A A G T C A C G T A G T C C G T A C G T A T A G C
p-value:1e-14
log p-value:-3.382e+01
Information Content per bp:1.848
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 17.2bp
Average Position of motif in Background55.4 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTGAVTAATGHA-
--TGAATTATGCAT
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A A C G T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTGAVTAATGHA
--TGATTGATGA-
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTGAVTAATGHA
GTTGCGCAAT---
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTGAVTAATGHA---
-ATGAATWATTCATGA
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A A C G T A C G T A C G T
A C G T G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTTGAVTAATGHA-
--TGATTRATGGCY
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

CEBPB/MA0466.2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGAVTAATGHA
ATTGCGCAAT---
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T A C G T A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGAVTAATGHA
ATTGCGCAAT---
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGAVTAATGHA
ATTGCGCAAT---
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTGAVTAATGHA---
-ATGCATWATGCATRW
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A A C G T A C G T A C G T
A C G T C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

CEBPD/MA0836.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTGAVTAATGHA
ATTGCGCAAT---
 A T C G A C G T A C G T A C T G C G T A T A C G A C G T C G T A C G T A A C G T C T A G G A T C C G T A
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T