Information for 20-CCCGGATCACGGA (Motif 31)

A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 31.2bp
Average Position of motif in Background49.7 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCGGATCACGGA
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGATCACGGA
TCGTACCCGCATCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCGGATCACGGA
--NGGATTAN---
 A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCGGATCACGGA
TACCCGCATN-----
 A C G T A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCGGATCACGGA
ACCCGGATGTA---
 A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCGGATCACGGA
TTGCCCGGATTAGG--
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCCGGATCACGGA
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCCGGATCACGGA
GTACCCGCATN-----
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCGGATCACGGA
----AGTCACGC-
 A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGATCACGGA
ANCAGGATGT----
 A C G T A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T