Information for 3-CYGGGAMATGYAGTTC (Motif 3)

A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
Reverse Opposite:
T C A G T G C A T G C A G T A C G A C T C T A G G T A C C G T A A G C T A C G T G A C T G A T C A T G C A G T C T C A G T A C G
p-value:1e-17
log p-value:-4.112e+01
Information Content per bp:1.590
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif414.1
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets50.2 +/- 25.9bp
Average Position of motif in Background50.3 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CYGGGAMATGYAGTTC
--GGGAATTGTAGT--
 A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CYGGGAMATGYAGTTC
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CYGGGAMATGYAGTTC
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CYGGGAMATGYAGTTC----
---NNNANTGCAGTGCNNTT
 A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CYGGGAMATGYAGTTC-
--GGGTCAACGAGTTCA
 A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C A C G T
A C G T A C G T C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CYGGGAMATGYAGTTC
CGCGCCGGGTCACGTA----
 A C G T A C G T A C G T A C G T A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CYGGGAMATGYAGTTC
CSTGGGAAAD-------
 A C G T A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CYGGGAMATGYAGTTC
AGAGCGGGGTCAAGTA----
 A C G T A C G T A C G T A C G T A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CYGGGAMATGYAGTTC
TGGCGGGAAAHB------
 A C G T A C G T A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CYGGGAMATGYAGTTC
--TGGAACAGMA----
 A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T