Information for 10-MCGTGCTCAGACG (Motif 18)

G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
Reverse Opposite:
A G T C A C T G C G A T A T G C A G C T A C T G C G T A A C T G A G T C T C G A A T G C A C T G A C G T
p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.818
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.3 +/- 16.1bp
Average Position of motif in Background43.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----MCGTGCTCAGACG
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--MCGTGCTCAGACG
RTACGTGC-------
 A C G T A C G T G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--MCGTGCTCAGACG
GGACGTGC-------
 A C G T A C G T G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:MCGTGCTCAGACG---
------CCAGACRSVB
 G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---MCGTGCTCAGACG-
CAGATGTGCACATACGT
 A C G T A C G T A C G T G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:MCGTGCTCAGACG-
---TGCGCAGGCGC
 G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G A C G T
A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:MCGTGCTCAGACG
---TGCCCAGNHW
 G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---MCGTGCTCAGACG
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:MCGTGCTCAGACG
----GCTCCG---
 G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----MCGTGCTCAGACG
GGGTACGTGC-------
 A C G T A C G T A C G T A C G T G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T