p-value: | 1e-10 |
log p-value: | -2.476e+01 |
Information Content per bp: | 1.859 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 2.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 59.9 +/- 18.6bp |
Average Position of motif in Background | 62.6 +/- 15.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT -TGACCTTGACCT |
|
|
|
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT -TGACCTTGACCT |
|
|
|
Nr5a2/MA0505.1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -MSGGCCCTGAMMT- GCTGACCTTGAACTN |
|
|
|
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT -TGACCTTGAN-- |
|
|
|
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | MSGGCCCTGAMMT RGGGCACTAACY- |
|
|
|
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -MSGGCCCTGAMMT NAGGTCANTGACCT |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT-- -------TGACCTYA |
|
|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT--- ------CTGACCTTTG |
|
|
|
RORA/MA0071.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT---- -------TGACCTTGAT |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | MSGGCCCTGAMMT -------TGACCT |
|
|
|