Information for 3-ACTGTVAGCASATAMT (Motif 10)

C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
Reverse Opposite:
C T G A C A T G A G C T C G T A A G C T A T C G C G A T A T C G A G T C C G A T A C T G T G C A A G T C C G T A A C T G C G A T
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.645
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif5.91%
Number of Background Sequences with motif378.9
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets50.9 +/- 23.6bp
Average Position of motif in Background51.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACTGTVAGCASATAMT
---GTCAGCANNTN--
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTGTVAGCASATAMT
--NGTCAGCANTTT--
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTGTVAGCASATAMT
CTGAGTCAGCAATTT--
 A C G T C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACTGTVAGCASATAMT
HWWGTCAGCAWWTTT-
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTVAGCASATAMT
NCTANGTCAGCAAATTT-
 A C G T A C G T C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACTGTVAGCASATAMT
GCTGAGTCAGCAATTTTT
 A C G T A C G T C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACTGTVAGCASATAMT--
---ATTTGCATACAATGG
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T A C G T A C G T
A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTGTVAGCASATAMT
AAAGTAAACAAAAATT
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTGTVAGCASATAMT
TGAGTCAGCA------
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTGTVAGCASATAMT-
TACATGTGCACATAAAA
 C G T A G T A C G C A T T C A G A C G T T G A C C G T A C T A G T A G C C G T A T A G C C T G A G C A T T C G A G T A C A G C T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A