Information for 4-AGKKCCTSSTGGCSAG (Motif 8)

C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C T G A G T C A G T C C G T A A T G C A T C G G T C A A C T G A T C G G T A C G T C A A G T C A C G T
p-value:1e-11
log p-value:-2.703e+01
Information Content per bp:1.864
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 24.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
--TGCCCNGGGGCA--
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
--TGCCCTNGGGCA--
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
--TGCCCTNGGGCA--
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGKKCCTSSTGGCSAG
NAGGTCACNNTGACC--
 A C G T C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
ACTTCCTGNT------
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
-NTGCCCTAGGGCAA-
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
ACTTCCTBGT------
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGKKCCTSSTGGCSAG
ACATCCTGNT------
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
----CCACGTGGNN--
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGKKCCTSSTGGCSAG
AGGNCANNGTGACCT-
 C G T A A C T G A C G T A C T G A T G C A G T C A C G T T A C G A T C G A C G T A C T G A C T G A G T C A T G C C G T A A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T